Pixel Shifting

Pixel shifting is a process used in conjunction with Mask Subtraction to correct for movement of the patient between exposures, so as to give the best alignment and therefore the best masking of fixed structures possible. In general, there needs to be a different shift factor for each frame in an image (if there has been movement between the mask and the image frames, then there is also likely to be movement between the image frames!)

Due to this complexity, Pixel shifting is not directly supported in the COM version of DicomObjects through simple properties (like Mask or Maskframe for unshifted subtraction) but is is supported through use of the DICOM “Mask Subtraction Sequence” (Mask Module) which may be present in either the image itself, or more commonly in a DICOM Presentation state object. This sequence allows a great deal of complexity and is used internally by DicomObjects, and the following VB code gives an idea how to use it.

DicomObjects.NET

DicomObjects.NET uses a very different and more flexible model to control masking and pixel shifting using the MaskRanges.

 image.SetSimpleMasking(1, MaskMode.AverageSubtraction);
 image.MaskRanges[0].MaskFraction = 0.25f;
 image.MaskRanges[0].MaskShift = new PointF(20, 20);

Alternatively, you can add MaskSubtractionSequence to the Image

 DicomDataSetCollection maskSubtractionSequence = new DicomDataSetCollection();
 DicomDataSet masking = new DicomDataSet();
 masking.Add(Keyword.MaskOperation, "AVG_SUB");
 masking.Add(Keyword.MaskFrameNumbers, 1);           
 masking.Add(Keyword.MaskSubPixelShift, new float[] { 50, 80 });
 maskSubtractionSequence.Add(masking);
 image.DataSet.Add(Keyword.MaskSubtractionSequence, maskSubtractionSequence);

DicomObjects.COM

This example uses two items in the sequence to indicate that:

More complex examples are also supported using “Time Interval Differencing” or averaging of multiple mask frames, but these are beyond the scope of this article - see DICOM Part 3 section C.7.6.10 for more information.

 Dim shift(1 To 2) As Single                             ' need an array to hold two shift values 
 Dim range(1 To 2) As Single                             ' need an array to hold ends of frame range 
 Dim MaskSequence As New DicomDataSets 

The first range:

 Dim MaskSequenceItem1 As New DicomDataSet
 MaskSequenceItem1.Attributes.Add &H28, &H6101, "AVG_SUB" ' fixed value to indicate normal subtraction
 range(1) = 6
 range(2) = 10
 MaskSequenceItem1.Attributes.Add &H28, &H6102, range
 MaskSequenceItem1.Attributes.Add &H28, &H6110, 4         ' the mask frame
 shift(1) = 1                                             ' note that Y comes first!
 shift(2) = -2
 MaskSequenceItem1.Attributes.Add &H28, &H6114, shift
 MaskSequence.Add MaskSequenceItem1

The second range:

 Dim MaskSequenceItem2 As New DicomDataSet
 MaskSequenceItem2.Attributes.Add &H28, &H6101, "AVG_SUB" ' fixed value to indicate normal subtraction
 range(1) = 11
 range(2) = 15
 MaskSequenceItem2.Attributes.Add &H28, &H6102, range
 MaskSequenceItem2.Attributes.Add &H28, &H6110, 5         ' the mask frame
 shift(1) = 0                                             ' note that Y comes first!
 shift(2) = 3
 MaskSequenceItem2.Attributes.Add &H28, &H6114, shift
 MaskSequence.Add MaskSequenceItem2

Add to the image, and suggest use of subtraction mode for viewing

 im.Attributes.Add &H28, &H6100, MaskSequence
 im.Attributes.Add &H28, &H1090, "SUB"     ' indicate to display in subtraction mode

Note, this example uses modification of the image as stored in memory, and developers should be careful as to whether or not they wish to persist any such modification in images sent or stored elsewhere. In general, modification of existing images is not recommended!


We use cookies to give you the best possible experience on our website. By continuing to use this website, you agree with our use of cookies. for more information please click HERE